Then there is the factor that any mist will collect on the under-side of leaves where stomata are abundant.
Milli-bubbles - 1 mm to 1μm
Micro-bubbles - 10 μm to 50 μm
Nano-bubbles < 200 nm
Seems odd that these classes do not overlap, but then I do make
the rules up.
Stomatal pores could be between 30 μm and 150 μm in diameter. Stomatal density could be between 30 and 300 per mm-squared. Sorry this is vague, but it varies from species to species and adaptation to submersion.
I am guessing that milli-bubbles get trapped in the stomatal opening. Nano-bubbles and some micro-bubbles can probably enter the mesophyll freely. Drop checkers can probably trap and collect all three bubble classes.
I am sure that the concentration of dissolved carbon dioxide is important, but perhaps the gas bubbles are also very useful to living plant tissue. I guess that if you wanted to get accurate drop checker results for fully dissolved carbon dioxide, then you would need to remove the bubbles, and that this could potentially be degassing your "diffused" carbon dioxide in the same process. It makes me wonder how feasible it is to measure dissolved carbon dioxide levels without using the pH drop technique. Moreover, whether you use a drop checker or a pH drop, I wonder whether the dissolved carbon dioxide concentration would matter that much if bubbles are effective nutrient transporters anyway. Overall the drop checker is just a visual index and the pH drop is a measure of dissolved carbon dioxide potential. Some logic would apply if you used a grade of fine filter paper over your drop checker matching the size of the average stomatal opening, like Whatman grade 4; but you could alternatively go for something finer like Whatman grade 5; so why not use several filtered drop checkers so that you know the impact of gas bubble size if you were interested. Also, it is likely that fish gills trap or absorb carbon dioxide gas bubbles, so this is also relevant.
My own view is that 'pearling' is also very useful to observe. Anecdotal evidence regarding visual cues like drop checkers are still very useful. Most of this is fairly paradoxical, but if I had to pick, I would say do all three because gas bubbles matter.

Cheers for this post. I am getting swollen feet (and far worse symptoms) and I am convinced that I am close to 4,000 ppm sometimes, so I'll ask my doctor for a kit because they are coming around soon.